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    Oncomine Research

    Category  Genomics>Gene Expression Analysis/Profiling/Tools

    Abstract  Oncomine Research is an advanced online cancer gene
    expression analysis system dedicated to the academic and non-profit
    research community.

    Oncomine combines a rapidly growing compendium of 20,000+ cancer
    transcriptome profiles with a sophisticated analysis engine and a
    powerful web application for data-mining and visualization. Oncomine
    facilitates rapid and reliable biomarker and therapeutic target discovery,
    validation and prioritization.

    Oncomine was developed by physicians, scientists, and software
    engineers at the University of Michigan and is now fully supported for
    the academic and non-profit research community by Compendia
    Bioscience.

    Oncomine Research is based on the original Oncomine product
    provided by the University of Michigan to the academic community.
    Product is provided under a free license for non-commercial users
    pursuing non-commercial purposes.

    Note 1: Oncomine Research Edition main features include many of the
    same features as Oncomine Professional Edition such as, Gene Search,
    Profile Search, Meta Analysis, Gene Enrichment and Outlier Analysis.
    See Oncomine Professional (G6G Product Number 20014) for
    additional information.

    Manufacturer also offers a Oncomine Research Premium Edition -
    includes all of the added functionality and features that have been
    added to Oncomine Professional and Oncomine Concepts Edition such
    as custom gene filters and integration with Ingenuity Pathways Analysis
    software. See Note 2 below and Oncomine Concepts Map (G6G
    Product Number 20015) for additional information.

    Note 2: Integration of Oncomine with Ingenuity Pathways Analysis (see
    G6G Product Number 20017) - A key strength of the Oncomine system
    is the ease and speed at which abstract relationships between disparate
    concepts such as drug treatments and patient response can be
    identified. The scale, diversity, and independent nature of the data in the
    Oncomine system reinforces confidence in results. When coupled with
    the Ingenuity Pathways Analysis software, researchers are enabled with
    advanced tools to develop and test hypotheses, and then explore the
    causal basis for disease and clinical outcome at the systems level.

    System Requirements  

    Operating system configuration
    Microsoft Windows™ XP Professional, Version 2002, Service Pack 2

    Browser configuration
    Microsoft® Internet Explorer® 7 as well as version 6
    Version 7.0.5730.11
    Cipher Strength: 128-bit

    Settings:
    Internet Zone
    Security level for this zone: Medium-high
    Cookies: Accept Session Cookies. Accept First-Party Cookies
    Use SSL 3.0
    JavaScript must be enabled.
    SVG viewer
    Adobe™ SVG Viewer 3.0

    Other configuration notes

    Use of Oncomine does not typically require additional system memory
    beyond normal web-based applications, a lack of memory may cause
    performance degradation and instability in Microsoft Windows.

    Use of Oncomine with Mozilla Firefox® is not recommended due to
    errors which occur in the SVG viewer.

    Use of Oncomine along with Google® Web Accelerator is not
    recommended as caching results in a failure to update views.

    We do not have reports of success using Oncomine on Apple platforms.
    A number of limitations have been observed.

    Manufacturer   Home office; see web site for international locations.

    Compendia Bioscience, Inc.
    210 South Fifth Avenue, Suite A
    Ann Arbor, MI 48104
    USA
    Tel: (734) 330-2259
    Fax: (734) 222-0242
    sales@compendiabio.com (info, site license)

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