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    Luxid for Life Sciences

    Category  Cross-Omics>Data/Text Mining Systems/Tools

    Abstract   Luxid for Life Sciences is a complete and leading-edge
    information discovery solution based on awarded Text Mining
    technologies from TEMIS. Luxid interprets the results of the extraction
    process and offers a complete information discovery portal. The
    advanced features of Luxid provide a wide range of possibilities to
    search, navigate, view and analyze the results. Luxid applies custom
    filters, conducts time analyses, provides information clustering and
    produces histograms, graphs and distribution curves using its visual
    components.

    Key features/capabilities include:

    1) Domain-specific Knowledge Extraction -- Multilingual and domain-
    specific annotators detect and extract high-value business-centric
    information from unstructured data, by reliably identifying entities and
    semantic relations.

    2) Faceted Search -- To build the most accurate document set, users
    refine their search using self-adjusting filters relying on context-related
    entities and semantic relations.

    3) Multi-dimensional Analysis -- A broad range of dynamic charts,
    tables, cross-tabs, and reports reveal the meaning behind the data.
    Users gain instant access to multiple views and get insight by slicing &
    dicing, drilling up & down, bringing information into place.

    4) Knowledge Browsing -- To unveil information dependencies, users
    intuitively navigate within a network of entities, either statistically linked
    by their proximity, or connected by their semantic relation.

    5) Targeted Information Sharing -- To support corporate policy of
    information sharing throughout the organization, multiple-view
    dashboards are provided to users through personalized and dynamic
    ‘Centers of Interest’.

    Luxid architecture -- Luxid has been structured into three (3) stackable
    software applications:

    1) Luxid Information Analytics -- enables information discovery
    leveraging Luxid Information Mart through a web-based and feature-rich
    portal designed to search and analyze information, discover and share
    underlying knowledge with information consumers.

    2) Luxid Information Mart -- federates heterogeneous sources and
    enriches the harvested document leveraging Luxid Annotation Factory in
    order to build the knowledge base powering the information discovery.

    3) Luxid Annotation Factory -- processes documents of any format to
    annotate and enrich them with extracted metadata, such as entities,
    relations, categories, topics, and attributes. Built as a robust and
    scalable platform, its deep understanding of all major languages
    powers the ability to reliably identify high value information across
    domains and geographies.

    The key innovative features of how Luxid can help your Research &
    Development team(s) are as follows:

    1) Accurate extraction of domain-specific entities (including genes,
    proteins, enzymes, symptoms, pathologies, chemical classes and
    compounds, tissues, organisms, cells…) and deep understanding of
    scientific terminology.

    2) Advanced and innovative analyses and navigation tools for the
    discovery of binding facts and relations such as treatment indication,
    treatment efficacy or safety, diagnosis of pathologies, as well as
    expression, localization, binding, regulation, activation or inhibition of
    genes and proteins.

    3) Real-time federation of heterogeneous sources thanks to native
    connectors [Medical Literature Analysis and Retrieval System Online
    (Medline), Micropatent (source for online patent and trademark
    information), Patent offices…] and integration with Enterprise Content
    Management solutions.

    4) Sharing of multiple-view dashboards (Centers of Interest), generation
    of dynamic reports and definition of user-specific alerts.

    The key innovative features of how Luxid can optimize your Intellectual
    Property (IP) assets management are as follows:

    1) Boost patent search capability by enabling scientists to sketch a
    chemical structure and retrieve all patents containing structurally similar
    compounds.

    2) Spot and gather exhaustive relevant evidence in a time-constrained
    environment, thanks to rapid document reading, instant access to
    patent specific information, and flexible export options.

    3) Detect overlapping or complementary portfolio with automatic
    generation of patent landscape through on-the-fly clustering around a
    company, and identify strategic players around promising molecules or
    technologies through multidimensional analysis.

    4) Build multiple view dashboards targeted to specific research areas
    and generate competitor-centric alerts.

    The key innovative features of how Luxid can help comply with safety
    regulations are as follows:

    1) Turn patient’s expressed symptoms and feelings into actionable
    data, leveraging Luxid semantic annotations to assess the severity and
    reality of potential rising risks. Apply time analysis to detect trends and
    shifts in extracted signals.

    2) Build dashboards monitoring safety issues and export validated data
    to in-house discovery databases.

    3) Adjust user profiles, customize content-based alerts and tune source
    access to transparently match the new criteria associated with policy
    changes.

    System Requirements  

    SERVER

    Operating systems:
    - Windows 2000, 2003
    - Suse Enterprise 10

    Minimal hardware requirements:
    - Intel Pentium IV 2GHz or equivalent, 1Gb RAM

    Supported Repository Databases:
    - Oracle 9i
    - MS SQL Server 2005
    - MySQL 5.0

    Application server :
    - Tomcat 5.5 or higher

    Java :
    - Java 1.4.2 or 1.5

    CLIENT

    Minimal requirements:
    - Windows 2000, XP, Vista
    - Internet browser: Internet Explorer 6.0 or higher
    - Macromedia Flash 8 plugin or higher

    Minimal hardware requirements:
    - Intel Pentium III 800MHz or equivalent, 512 Mb RAM

    Manufacturer   Home office; see web site for international locations.
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