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(Company, Academic Institution, Consortium)
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USCS Genome Browser
Epidemiology, Department of Bioinformatics Differential Expression Effector Prediction (DEEP) Universidad Autónoma de Madrid, National Center for Biotechnology (CNB), Biocomputing Unit (BCU) anatomic Gene Expression Mapping Platform (aGEM) uni software plus GmbH machine learning framework version 1.6 Université Libre de Bruxelles (ULB), Laboratoire de Bioinformatique des Génomes et des Réseaux (BiGRe) Network Analysis Tools (NeAT) University Lyon, Institut de Biologie et Chimie des Protéines MatrixDB University of Alberta, Departments of Computing Science and Biological Sciences PolySearch University of Arizona, Arizona Cancer Center and Southwest Environmental Health Sciences Bioinformatics Core Bio Resource for Array Genes University of Athens, RTS-image Group Microarray-MD University of Auckland, Auckland Bioengineering Institute CellML CellML Tools University of California, Berkeley: School of Information and Physical Biosciences Division BioText Search Engine University of California Davis, University of California Santa Barbara, University of California, San Diego, Kepler/Core Team Kepler University of California, Irvine, Department of Computer Science GraphCrunch University of California, San Diego, Departments of Medicine and Bioengineering CellCircuits University of Camerino, Laboratory for Interdisciplinary Technologies in Bioinformatics (LITBIO), Complex Systems (CoSy) Research Group BioWMS University of Cambridge, Anatomy School, Department of Physiology, Development and Neuroscience StochSim University of Colorado Boulder, Center for Neuroscience , Institute of Cognitive Science , Department of Psychology and Neuroscience, Dr. Randall C. O'Reilly, Professor Emergent University of Colorado Denver and Health Sciences Center, Aurora, CO PhenoGen Informatics University of Connecticut Health Center, Center for Cell Analysis and Modeling (CCAM), National Resource for Cell Analysis and Modeling (NRCAM) gfit NRCAM Virtual Cell University of Dundee, Bioinformatics and Computational Biology Research, The Barton Group PIPs database University of Edinburgh, School of Molecular and Clinical Medicine, Medical Genetics Section PROSPECTR SUSPECTS University of Freiburg, Freiburg Center of Data Analysis and Modeling (FDM), Thomas Maiwald, Jens Timmer PottersWheel University of Glasgow, Department of Computing Science, Inference Research Group BioBayes University of Helsinki, Finland OpenBUGS University of Illinois at Urbana-Champaign (UIUC), Graduate School of Library and Information Science, National Center for Supercomputing Applications Meandre University of Illinois, Department of Bioengineering, Computational Biology Lab, Sheng Zhong Lab OSCAR: Open System for Clustering Analysis of Microarray Data University of Leeds, Institute of Molecular and Cellular Biology metaTIGER University of Leuven, Bioinformatics Group, Department of Electrical Engineering (ESAT-SCD) ENDEAVOUR University of Ljubljana and Baylor College of Medicine GenePath University of Maastricht, BiGCaT Bioinformatics and University of California, San Francisco, Gladstone Institutes, Conklin Lab WikiPathways University of Malaga, Campus Teatinos, ETSI Informática, Bioinfomatics and Information Technologies Laboratory (BitLAB) Magallanes University of Manchester, School of Computer Science, Professor Carole Goble API Consumer Tool University of Manchester, The National Centre for Text Mining (NaCTeM), School of Computer Science FACTA Taverna University of Manitoba, Department of Plant Science BIRCH (Biological Research Computing Hierarchy) University of Maryland, Center for Bioinformatics and Computational Biology GeneMerge University of Maryland School of Medicine, Institute for Genome Sciences Genomic Metadata for Infectious Agents (GeMInA) University of Michigan GenoMesh miniTUBA PHIDIAS Vaccine Investigation and Online Information Network (VIOLIN)
Retrieval (CLAIR) group, National Center for Integrative Biomedical Informatics (NCIBI). NCIBI is based at the University of Michigan as a part of The Center for Computational Medicine and Biology (CCMB) Gene Interaction Network (GIN)
CancerSim University of North Carolina at Charlotte, Dept. of Bioinformatics and Genomics, Loraine lab Integrated Genome Browser (IGB) University of North Carolina, Departments of Genetics and Biology, Mohlke lab and the Vision lab CAESAR University of Oxford, Learning Technologies Group, Modelling4All BehaviourComposer 2.0 University of Padova, Department of Biology, Computational Genomics Laboratory (CompGen) A-MADMAN University of Pittsburg, Decision Systems Laboratory, Department of Information Science and Telecommunications, Intelligent Systems Program GeNIe & SMILE University of Southampton and The University of Manchester, United Kingdom myExperiment Virtual Research Environment University of Tampere, Finland, Institute of Medical Technology ImmunoDeficiency Resource (IDR) Immunome Knowledge Base (IKB) University of Tartu, Institute of Computer Science, Bioinformatics, Algorithmics, and Data Mining group BIIT KEGGanim Visualization of Hierarchical Clustering (VisHiC) University of Tennessee, Department of Anatomy and Neurobiology, Center of Genomics and Bioinformatics The GeneNetwork and WebQTL
Orthopedic Surgery-Campbell Clinic, Weikuan Gu Laboratory Phenotype Genotype Mapper (PGMapper) University of Tennessee Health Science Center, Department of Pharmacology Chilibot
Genome Center CO-eXPRESsed gene database (COXPRESdb) University of the Mediterranean GINsim University of Twente , BioRange group, Enschede, Netherlands e-BioFlow University of Vigo, Higher Technical School of Computer Engineering; Spanish National Cancer Research Centre (CNIO), Structural Biology and Biocomputing Programme; and University of Vigo, Informatics Department WhichGenes University of Virginia COXEN Version 1.0
Weka University of Washington, Computational Systems Biology, Sauro Lab Jarnac Systems Biology Workbench (SBW)
JSim Modeling System University of Washington, Princeton University, National Heart Lung and Blood Institute SeattleSNPs PGA University of Washington School of Medicine, Computational Biology Research Group, Dept of Microbiology Bioverse |
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