Agilent Mass Profiler Professional Software

Category Proteomics>Mass Spectrometry Analysis/Tools

Abstract Agilent Mass Profiler Professional software is a chemometrics software package designed to exploit the high information content of mass spectrometry (MS) data.

Researchers can easily import, analyze and visualize gas chromatography/mass spectrometry (GC/MS), liquid chromatography/mass spectrometry (LC/MS), capillary electrophoresis/mass spectrometry (CE/MS) and inductively coupled plasma mass spectrometry (ICP-MS) data from large sample sets and complex MS data sets.

Mass Profiler Professional integrates smoothly with Agilent MassHunter Workstation and ChemStation software, and is ideal for any MS-based application where you need to determine relationships among sample group and variables, including metabolomics, proteomics, food safety, environmental, forensics and toxicology.

For metabolomics and proteomics studies, the optional Pathway Architect (an additional product) helps you evaluate MS data in biological context.

Agilent Mass Profiler Professional Software features/capabilities:

1) Allows comparison of multiple samples and/or multiple MS analysis platforms in a single project;

2) Designed for both scientists and statisticians, with guided and advanced workflows;

3) Provides comprehensive statistical tools including ANalysis Of VAriance (ANOVA), Principal Components Analysis (PCA), t-tests;

Volcano plots (The Volcano Plot view facilitates rapid identification of mass entities with a statistically significant fold-change between two experimental conditions);

Hierarchical trees, Self Organizing Maps (SOMs), Quality Threshold (QT) clustering, and Support Vector Machines (SVMs) for class prediction;

4) Generates inclusion list for subsequent MS/MS-based analyses to facilitate protein and metabolite identification;

5) Integrated ID Browser mirrors MassHunter Qualitative Software to allow identification using LC/MS Personal Compound Databases [METLIN (see below...), pesticides, forensics] and GC/MS libraries (NIST and Agilent Fiehn Metabolomics); and

6) R Scripting compatibility within Mass Profiler Professional allows you to further extend and customize statistical analysis and visualization capabilities.

METLIN Personal Metabolite Database Software --

Metabolite databases can greatly improve metabolite identification by narrowing the list of possible identities. The METLIN metabolite database is one of the most-comprehensive metabolite databases in the world today.

It includes masses, chemical formulas, and structures for over 15,000 endogenous and exogenous metabolites, and di- and tri-peptides.

Agilent Technologies is the exclusive provider of the METLIN Personal metabolite database, which can reside on a local PC, facilitating faster, easier searching for high-volume research. Searches are private, and proprietary compounds can be added to the METLIN Personal database.

METLIN Personal Metabolite Database Software features/capabilities:

1) Over 15,000 endogenous and exogenous metabolites, and di- and tri-peptides;

2) Masses, chemical formulas, and structures;

3) Private searching;

4) Ability to add proprietary compounds to the database;

5) Automated searches from a mass list maximize throughput; and

6) Links from MassHunter Workstation software and Agilent Mass Profiler Professional Software to the METLIN Personal database simplify operation.

System Requirements

Contact manufacturer.


Manufacturer Web Site Agilent Mass Profiler Professional Software

Price Contact manufacturer.

G6G Abstract Number 20056R

G6G Manufacturer Number 100130